Basic Information
Gene ID
Position
Scaffold2876:37405-38530 (-)
1125bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the calycin superfamily. Lipocalin family
Organism
Also AS AT3G47860

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
Lchi00878.g transcription factor
Lchi00913.g transcription factor
Lchi00930.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000302 response to reactive oxygen species BP
GO:0001101 response to acid chemical BP
GO:0001817 regulation of cytokine production BP
GO:0001818 negative regulation of cytokine production BP
GO:0001952 regulation of cell-matrix adhesion BP
GO:0001953 negative regulation of cell-matrix adhesion BP
GO:0002682 regulation of immune system process BP
GO:0002683 negative regulation of immune system process BP
GO:0002685 regulation of leukocyte migration BP
GO:0002686 negative regulation of leukocyte migration BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005496 steroid binding MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005615 extracellular space CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005829 cytosol CC
GO:0005840 ribosome CC
GO:0005975 carbohydrate metabolic process BP
GO:0005996 monosaccharide metabolic process BP
GO:0006006 glucose metabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0007162 negative regulation of cell adhesion BP
GO:0007275 multicellular organism development BP
GO:0007399 nervous system development BP
GO:0007417 central nervous system development BP
GO:0007420 brain development BP
GO:0007568 aging BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008285 negative regulation of cell population proliferation BP
GO:0008289 lipid binding MF
GO:0009266 response to temperature stimulus BP
GO:0009314 response to radiation BP
GO:0009408 response to heat BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009416 response to light stimulus BP
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0009611 response to wounding BP
GO:0009628 response to abiotic stimulus BP
GO:0009635 response to herbicide BP
GO:0009636 response to toxic substance BP
GO:0009642 response to light intensity BP
GO:0009644 response to high light intensity BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009791 post-embryonic development BP
GO:0009888 tissue development BP
GO:0009892 negative regulation of metabolic process BP
GO:0009966 regulation of signal transduction BP
GO:0009968 negative regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010117 photoprotection BP
GO:0010154 fruit development BP
GO:0010431 seed maturation BP
GO:0010565 regulation of cellular ketone metabolic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010640 regulation of platelet-derived growth factor receptor signaling pathway BP
GO:0010642 negative regulation of platelet-derived growth factor receptor signaling pathway BP
GO:0010646 regulation of cell communication BP
GO:0010648 negative regulation of cell communication BP
GO:0010810 regulation of cell-substrate adhesion BP
GO:0010812 negative regulation of cell-substrate adhesion BP
GO:0012505 endomembrane system CC
GO:0014012 peripheral nervous system axon regeneration BP
GO:0015485 cholesterol binding MF
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0019216 regulation of lipid metabolic process BP
GO:0019217 regulation of fatty acid metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019318 hexose metabolic process BP
GO:0021700 developmental maturation BP
GO:0022008 neurogenesis BP
GO:0022414 reproductive process BP
GO:0022626 cytosolic ribosome CC
GO:0023051 regulation of signaling BP
GO:0023057 negative regulation of signaling BP
GO:0030030 cell projection organization BP
GO:0030154 cell differentiation BP
GO:0030155 regulation of cell adhesion BP
GO:0030182 neuron differentiation BP
GO:0030334 regulation of cell migration BP
GO:0030336 negative regulation of cell migration BP
GO:0030425 dendrite CC
GO:0031099 regeneration BP
GO:0031102 neuron projection regeneration BP
GO:0031103 axon regeneration BP
GO:0031175 neuron projection development BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031347 regulation of defense response BP
GO:0031348 negative regulation of defense response BP
GO:0031976 plastid thylakoid CC
GO:0031977 thylakoid lumen CC
GO:0031984 organelle subcompartment CC
GO:0032101 regulation of response to external stimulus BP
GO:0032102 negative regulation of response to external stimulus BP
GO:0032386 regulation of intracellular transport BP
GO:0032387 negative regulation of intracellular transport BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0032642 regulation of chemokine production BP
GO:0032682 negative regulation of chemokine production BP
GO:0032879 regulation of localization BP
GO:0032880 regulation of protein localization BP
GO:0032934 sterol binding MF
GO:0032991 protein-containing complex CC
GO:0033157 regulation of intracellular protein transport BP
GO:0033554 cellular response to stress BP
GO:0033993 response to lipid BP
GO:0034357 photosynthetic membrane CC
GO:0034442 regulation of lipoprotein oxidation BP
GO:0034443 negative regulation of lipoprotein oxidation BP
GO:0036094 small molecule binding MF
GO:0036477 somatodendritic compartment CC
GO:0040007 growth BP
GO:0040012 regulation of locomotion BP
GO:0040013 negative regulation of locomotion BP
GO:0042060 wound healing BP
GO:0042127 regulation of cell population proliferation BP
GO:0042221 response to chemical BP
GO:0042246 tissue regeneration BP
GO:0042306 regulation of protein import into nucleus BP
GO:0042308 negative regulation of protein import into nucleus BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042651 thylakoid membrane CC
GO:0042995 cell projection CC
GO:0043005 neuron projection CC
GO:0043025 neuronal cell body CC
GO:0043178 alcohol binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044087 regulation of cellular component biogenesis BP
GO:0044238 primary metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044297 cell body CC
GO:0044421 obsolete extracellular region part CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044445 obsolete cytosolic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044463 obsolete cell projection part CC
GO:0044464 obsolete cell part CC
GO:0045833 negative regulation of lipid metabolic process BP
GO:0045922 negative regulation of fatty acid metabolic process BP
GO:0046320 regulation of fatty acid oxidation BP
GO:0046322 negative regulation of fatty acid oxidation BP
GO:0046822 regulation of nucleocytoplasmic transport BP
GO:0046823 negative regulation of nucleocytoplasmic transport BP
GO:0048316 seed development BP
GO:0048468 cell development BP
GO:0048471 perinuclear region of cytoplasm CC
GO:0048513 animal organ development BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0048589 developmental growth BP
GO:0048608 reproductive structure development BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048660 regulation of smooth muscle cell proliferation BP
GO:0048662 negative regulation of smooth muscle cell proliferation BP
GO:0048666 neuron development BP
GO:0048678 response to axon injury BP
GO:0048699 generation of neurons BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050727 regulation of inflammatory response BP
GO:0050728 negative regulation of inflammatory response BP
GO:0050746 regulation of lipoprotein metabolic process BP
GO:0050748 negative regulation of lipoprotein metabolic process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051049 regulation of transport BP
GO:0051051 negative regulation of transport BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051223 regulation of protein transport BP
GO:0051224 negative regulation of protein transport BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051241 negative regulation of multicellular organismal process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051248 negative regulation of protein metabolic process BP
GO:0051270 obsolete regulation of cellular component movement BP
GO:0051271 obsolete negative regulation of cellular component movement BP
GO:0051716 cellular response to stimulus BP
GO:0051893 regulation of focal adhesion assembly BP
GO:0051895 negative regulation of focal adhesion assembly BP
GO:0055035 plastid thylakoid membrane CC
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060322 head development BP
GO:0060341 regulation of cellular localization BP
GO:0060587 regulation of lipoprotein lipid oxidation BP
GO:0060588 negative regulation of lipoprotein lipid oxidation BP
GO:0061458 reproductive system development BP
GO:0061564 axon development BP
GO:0062012 regulation of small molecule metabolic process BP
GO:0062014 negative regulation of small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0070201 regulation of establishment of protein localization BP
GO:0071637 regulation of monocyte chemotactic protein-1 production BP
GO:0071638 negative regulation of monocyte chemotactic protein-1 production BP
GO:0071695 anatomical structure maturation BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0090087 regulation of peptide transport BP
GO:0090109 regulation of cell-substrate junction assembly BP
GO:0090317 negative regulation of intracellular protein transport BP
GO:0097159 organic cyclic compound binding MF
GO:0097305 response to alcohol BP
GO:0097447 dendritic tree CC
GO:0097458 obsolete neuron part CC
GO:0120025 plasma membrane bounded cell projection CC
GO:0120036 plasma membrane bounded cell projection organization BP
GO:0120038 obsolete plasma membrane bounded cell projection part CC
GO:1900015 regulation of cytokine production involved in inflammatory response BP
GO:1900016 negative regulation of cytokine production involved in inflammatory response BP
GO:1900180 regulation of protein localization to nucleus BP
GO:1900181 negative regulation of protein localization to nucleus BP
GO:1901562 response to paraquat BP
GO:1901700 response to oxygen-containing compound BP
GO:1901888 regulation of cell junction assembly BP
GO:1901889 negative regulation of cell junction assembly BP
GO:1903391 regulation of adherens junction organization BP
GO:1903392 negative regulation of adherens junction organization BP
GO:1903827 regulation of protein localization BP
GO:1903828 negative regulation of protein localization BP
GO:1904589 regulation of protein import BP
GO:1904590 negative regulation of protein import BP
GO:1904950 negative regulation of establishment of protein localization BP
GO:1990904 ribonucleoprotein complex CC
GO:2000097 regulation of smooth muscle cell-matrix adhesion BP
GO:2000098 negative regulation of smooth muscle cell-matrix adhesion BP
GO:2000145 regulation of cell motility BP
GO:2000146 negative regulation of cell motility BP
GO:2000401 regulation of lymphocyte migration BP
GO:2000402 negative regulation of lymphocyte migration BP
GO:2000404 regulation of T cell migration BP
GO:2000405 negative regulation of T cell migration BP