Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
MD02G1146300.v1.1
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Position
Chr02:12084535-12085497 (-)
962bp
Gene Type
gene
Gene Description (Protein Product)
Zinc-finger homeodomain protein
Organism
Malus domestica
Also AS MD02G1146300AT2G18350

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
MD15G1443500.v1.1 Zinc-finger homeodomain protein
MD17G1198100.v1.1 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
MD14G1094700.v1.1 Homeobox-leucine zipper protein
Regulatory gene
MD05G1054600.v1.1 Protein BASIC PENTACYSTEINE4-like
MD08G1016400.v1.1 Protein BASIC PENTACYSTEINE6-like
MD10G1062100.v1.1 Protein BASIC PENTACYSTEINE4-like
Target gene
MD00G1000500.v1.1 Myb family transcription factor
MD00G1000900.v1.1 DNA recombination
MD00G1001700.v1.1 Component of the replication protein A complex (RPA) required for DNA recombination; repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046983 protein dimerization activity MF
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF