Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
MD09G1134700.v1.1
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Position
Chr09:10352735-10355364 (-)
2629bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family
Organism
Malus domestica
Also AS MD09G1134700AT4G12650

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
MD12G1120600.v1.1 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked
MD10G1314900.v1.1 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked
MD12G1120700.v1.1 Ubiquitin-like domain
Regulatory gene
MD00G1032600.v1.1 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains
MD00G1058800.v1.1 Myb-related protein
MD00G1065700.v1.1 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005769 early endosome CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0005911 cell-cell junction CC
GO:0008150 biological_process BP
GO:0009506 plasmodesma CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0030054 cell junction CC
GO:0031090 organelle membrane CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032386 regulation of intracellular transport BP
GO:0032388 positive regulation of intracellular transport BP
GO:0032879 regulation of localization BP
GO:0032880 regulation of protein localization BP
GO:0033157 regulation of intracellular protein transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048518 positive regulation of biological process BP
GO:0050789 regulation of biological process BP
GO:0051049 regulation of transport BP
GO:0051050 positive regulation of transport BP
GO:0051222 positive regulation of protein transport BP
GO:0051223 regulation of protein transport BP
GO:0055044 symplast CC
GO:0060341 regulation of cellular localization BP
GO:0065007 biological regulation BP
GO:0070201 regulation of establishment of protein localization BP
GO:0070861 regulation of protein exit from endoplasmic reticulum BP
GO:0070863 positive regulation of protein exit from endoplasmic reticulum BP
GO:0090087 regulation of peptide transport BP
GO:0090316 positive regulation of intracellular protein transport BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0098805 membrane CC
GO:1903827 regulation of protein localization BP
GO:1903829 positive regulation of protein localization BP
GO:1904951 positive regulation of establishment of protein localization BP
GO:2000008 regulation of protein localization to cell surface BP
GO:2000010 positive regulation of protein localization to cell surface BP