PPGR - Gene Detail

Basic Information

Gene ID	MD15G1237500.v1.1 View in Genome Browser
Position	Chr15:19544751-19547505 (+) 2754bp
Gene Type	gene
Gene Description (Protein Product)	prolyl 4-hydroxylase
Organism	Malus domestica
Also AS	MD15G1237500AT5G66060

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

MD16G1178200.v1.1 prolyl 4-hydroxylase

MD17G1070700.v1.1 Converts proline to delta-1-pyrroline-5-carboxylate

MD17G1206300.v1.1 Converts proline to delta-1-pyrroline-5-carboxylate

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004656	procollagen-proline 4-dioxygenase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0006082	organic acid metabolic process	BP
GO:0006464	protein modification process	BP
GO:0006520	amino acid metabolic process	BP
GO:0006575	cellular modified amino acid metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009888	tissue development	BP
GO:0009987	cellular process	BP
GO:0010015	root morphogenesis	BP
GO:0010053	root epidermal cell differentiation	BP
GO:0010054	trichoblast differentiation	BP
GO:0012505	endomembrane system	CC
GO:0016491	oxidoreductase activity	MF
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	MF
GO:0016706	2-oxoglutarate-dependent dioxygenase activity	MF
GO:0018126	protein hydroxylation	BP
GO:0018193	peptidyl-amino acid modification	BP
GO:0018208	peptidyl-proline modification	BP
GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	BP
GO:0019471	4-hydroxyproline metabolic process	BP
GO:0019511	peptidyl-proline hydroxylation	BP
GO:0019538	protein metabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0019798	procollagen-proline dioxygenase activity	MF
GO:0021700	developmental maturation	BP
GO:0022622	root system development	BP
GO:0030154	cell differentiation	BP
GO:0031543	peptidyl-proline dioxygenase activity	MF
GO:0031545	peptidyl-proline 4-dioxygenase activity	MF
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0036211	protein modification process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0048364	root development	BP
GO:0048468	cell development	BP
GO:0048469	cell maturation	BP
GO:0048731	system development	BP
GO:0048764	trichoblast maturation	BP
GO:0048765	root hair cell differentiation	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0051213	dioxygenase activity	MF
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071695	anatomical structure maturation	BP
GO:0071704	organic substance metabolic process	BP
GO:0080147	root hair cell development	BP
GO:0090558	plant epidermis development	BP
GO:0090627	plant epidermal cell differentiation	BP
GO:0099402	plant organ development	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901605	alpha-amino acid metabolic process	BP
GO:1905392	plant organ morphogenesis	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00330	Arginine and proline metabolism	-