Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
MD17G1169500.v1.1
View in Genome Browser
Position
Chr17:17250361-17251537 (+)
1176bp
Gene Type
gene
Gene Description (Protein Product)
SNAP receptor activity
Organism
Malus domestica
Also AS MD17G1169500AT5G46860

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
MD17G1171100.v1.1 SNAP receptor activity
MD17G1193300.v1.1 Ras-related protein
MD17G1194500.v1.1 Ras-related protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000045 autophagosome assembly BP
GO:0000149 SNARE binding MF
GO:0000323 lytic vacuole CC
GO:0000407 phagophore assembly site CC
GO:0001505 regulation of neurotransmitter levels BP
GO:0001772 immunological synapse CC
GO:0001910 regulation of leukocyte mediated cytotoxicity BP
GO:0001912 positive regulation of leukocyte mediated cytotoxicity BP
GO:0001914 regulation of T cell mediated cytotoxicity BP
GO:0001916 positive regulation of T cell mediated cytotoxicity BP
GO:0002165 instar larval or pupal development BP
GO:0002682 regulation of immune system process BP
GO:0002684 positive regulation of immune system process BP
GO:0002697 regulation of immune effector process BP
GO:0002699 positive regulation of immune effector process BP
GO:0002703 regulation of leukocyte mediated immunity BP
GO:0002705 positive regulation of leukocyte mediated immunity BP
GO:0002706 regulation of lymphocyte mediated immunity BP
GO:0002708 positive regulation of lymphocyte mediated immunity BP
GO:0002709 regulation of T cell mediated immunity BP
GO:0002711 positive regulation of T cell mediated immunity BP
GO:0002819 regulation of adaptive immune response BP
GO:0002821 positive regulation of adaptive immune response BP
GO:0002822 regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains BP
GO:0002824 positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains BP
GO:0003674 molecular_function MF
GO:0005484 SNAP receptor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005765 lysosomal membrane CC
GO:0005766 primary lysosome CC
GO:0005768 endosome CC
GO:0005769 early endosome CC
GO:0005770 late endosome CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005798 Golgi-associated vesicle CC
GO:0005886 plasma membrane CC
GO:0006605 protein targeting BP
GO:0006623 protein targeting to vacuole BP
GO:0006810 transport BP
GO:0006836 neurotransmitter transport BP
GO:0006869 lipid transport BP
GO:0006886 intracellular protein transport BP
GO:0006887 exocytosis BP
GO:0006892 post-Golgi vesicle-mediated transport BP
GO:0006896 Golgi to vacuole transport BP
GO:0006904 vesicle docking involved in exocytosis BP
GO:0006906 vesicle fusion BP
GO:0006914 autophagy BP
GO:0006996 organelle organization BP
GO:0007033 vacuole organization BP
GO:0007034 vacuolar transport BP
GO:0007041 lysosomal transport BP
GO:0007154 cell communication BP
GO:0007163 establishment or maintenance of cell polarity BP
GO:0007267 cell-cell signaling BP
GO:0007268 chemical synaptic transmission BP
GO:0007269 neurotransmitter secretion BP
GO:0007275 multicellular organism development BP
GO:0008021 synaptic vesicle CC
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008200 ion channel inhibitor activity MF
GO:0008285 negative regulation of cell population proliferation BP
GO:0008333 endosome to lysosome transport BP
GO:0009056 catabolic process BP
GO:0009791 post-embryonic development BP
GO:0009987 cellular process BP
GO:0010008 endosome membrane CC
GO:0010876 lipid localization BP
GO:0012505 endomembrane system CC
GO:0012506 vesicle membrane CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0015850 organic hydroxy compound transport BP
GO:0015918 sterol transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016079 synaptic vesicle exocytosis BP
GO:0016081 synaptic vesicle docking BP
GO:0016192 vesicle-mediated transport BP
GO:0016236 macroautophagy BP
GO:0016247 channel regulator activity MF
GO:0016248 channel inhibitor activity MF
GO:0017081 chloride channel regulator activity MF
GO:0017156 calcium-ion regulated exocytosis BP
GO:0019869 chloride channel inhibitor activity MF
GO:0019905 syntaxin binding MF
GO:0022406 membrane docking BP
GO:0022607 cellular component assembly BP
GO:0023052 signaling BP
GO:0023061 signal release BP
GO:0030100 regulation of endocytosis BP
GO:0030133 transport vesicle CC
GO:0030135 coated vesicle CC
GO:0030136 clathrin-coated vesicle CC
GO:0030139 endocytic vesicle CC
GO:0030140 trans-Golgi network transport vesicle CC
GO:0030141 secretory granule CC
GO:0030285 obsolete integral component of synaptic vesicle membrane CC
GO:0030301 cholesterol transport BP
GO:0030424 axon CC
GO:0030658 transport vesicle membrane CC
GO:0030659 cytoplasmic vesicle membrane CC
GO:0030672 synaptic vesicle membrane CC
GO:0031090 organelle membrane CC
GO:0031201 SNARE complex CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031300 obsolete intrinsic component of organelle membrane CC
GO:0031301 obsolete integral component of organelle membrane CC
GO:0031341 regulation of cell killing BP
GO:0031343 positive regulation of cell killing BP
GO:0031410 cytoplasmic vesicle CC
GO:0031647 regulation of protein stability BP
GO:0031902 late endosome membrane CC
GO:0031982 vesicle CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032879 regulation of localization BP
GO:0032880 regulation of protein localization BP
GO:0032940 secretion by cell BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033267 obsolete axon part CC
GO:0033344 cholesterol efflux BP
GO:0033365 protein localization to organelle BP
GO:0034058 endosomal vesicle fusion BP
GO:0034613 protein localization BP
GO:0035073 pupariation BP
GO:0035088 establishment or maintenance of apical/basal cell polarity BP
GO:0035210 prepupal development BP
GO:0035264 multicellular organism growth BP
GO:0040007 growth BP
GO:0042127 regulation of cell population proliferation BP
GO:0042582 azurophil granule CC
GO:0042886 amide transport BP
GO:0042995 cell projection CC
GO:0043005 neuron projection CC
GO:0043195 terminal bouton CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043679 axon terminus CC
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044306 neuron projection terminus CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044437 obsolete vacuolar part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044456 obsolete synapse part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044463 obsolete cell projection part CC
GO:0044464 obsolete cell part CC
GO:0044877 protein-containing complex binding MF
GO:0045055 regulated exocytosis BP
GO:0045121 membrane raft CC
GO:0045184 establishment of protein localization BP
GO:0045202 synapse CC
GO:0045324 late endosome to vacuole transport BP
GO:0045335 phagocytic vesicle CC
GO:0045807 positive regulation of endocytosis BP
GO:0046903 secretion BP
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0048227 plasma membrane to endosome transport BP
GO:0048278 vesicle docking BP
GO:0048284 organelle fusion BP
GO:0048471 perinuclear region of cytoplasm CC
GO:0048489 synaptic vesicle transport BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0048589 developmental growth BP
GO:0048856 anatomical structure development BP
GO:0050776 regulation of immune response BP
GO:0050778 positive regulation of immune response BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050821 protein stabilization BP
GO:0051049 regulation of transport BP
GO:0051050 positive regulation of transport BP
GO:0051128 regulation of cellular component organization BP
GO:0051130 positive regulation of cellular component organization BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051648 vesicle localization BP
GO:0051649 establishment of localization in cell BP
GO:0051650 establishment of vesicle localization BP
GO:0051656 establishment of organelle localization BP
GO:0055037 recycling endosome CC
GO:0060341 regulation of cellular localization BP
GO:0060627 regulation of vesicle-mediated transport BP
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0061245 establishment or maintenance of bipolar cell polarity BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0065009 regulation of molecular function BP
GO:0070382 exocytic vesicle CC
GO:0070727 cellular macromolecule localization BP
GO:0070820 tertiary granule CC
GO:0070925 organelle assembly BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072594 establishment of protein localization to organelle BP
GO:0072665 protein localization to vacuole BP
GO:0072666 establishment of protein localization to vacuole BP
GO:0090174 organelle membrane fusion BP
GO:0097458 obsolete neuron part CC
GO:0097479 synaptic vesicle localization BP
GO:0097480 establishment of synaptic vesicle localization BP
GO:0097708 intracellular vesicle CC
GO:0098563 obsolete intrinsic component of synaptic vesicle membrane CC
GO:0098588 bounding membrane of organelle CC
GO:0098589 membrane CC
GO:0098772 molecular function regulator activity MF
GO:0098793 presynapse CC
GO:0098794 postsynapse CC
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:0098837 postsynaptic recycling endosome CC
GO:0098845 postsynaptic endosome CC
GO:0098852 lytic vacuole membrane CC
GO:0098857 membrane microdomain CC
GO:0098916 anterograde trans-synaptic signaling BP
GO:0099003 vesicle-mediated transport in synapse BP
GO:0099106 ion channel regulator activity MF
GO:0099501 exocytic vesicle membrane CC
GO:0099503 secretory vesicle CC
GO:0099504 synaptic vesicle cycle BP
GO:0099536 synaptic signaling BP
GO:0099537 trans-synaptic signaling BP
GO:0099643 signal release from synapse BP
GO:0120025 plasma membrane bounded cell projection CC
GO:0120038 obsolete plasma membrane bounded cell projection part CC
GO:0140029 exocytic process BP
GO:0140056 organelle localization by membrane tethering BP
GO:0150034 distal axon CC
GO:1902683 regulation of receptor localization to synapse BP
GO:1902685 positive regulation of receptor localization to synapse BP
GO:1903076 regulation of protein localization to plasma membrane BP
GO:1903827 regulation of protein localization BP
GO:1904375 regulation of protein localization to cell periphery BP
GO:1905037 autophagosome organization BP
GO:1905475 regulation of protein localization to membrane BP
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
map04130 SNARE interactions in vesicular transport -