PPGR - Gene Detail

Gene ID	MD17G1218500.v1.1 View in Genome Browser
Position	Chr17:26576949-26579288 (+) 2339bp
Gene Type	gene
Gene Description (Protein Product)	60S ribosome subunit biogenesis protein NIP7 homolog
Organism	Malus domestica
Also AS	MD17G1218500AT4G15770

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)

MD17G1278600.v1.1 Pre-mRNA-splicing factor ATP-dependent RNA

MD17G1287700.v1.1 Notchless protein homolog

MD17G1234800.v1.1 DNA-directed RNA polymerases I; II; and III subunit

Load All Networks

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005730	nucleolus	CC
GO:0008150	biological_process	BP
GO:0022613	ribonucleoprotein complex biogenesis	BP
GO:0030684	preribosome	CC
GO:0030687	preribosome, large subunit precursor	CC
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0032991	protein-containing complex	CC
GO:0042254	ribosome biogenesis	BP
GO:0042273	ribosomal large subunit biogenesis	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0044085	cellular component biogenesis	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0070013	intracellular organelle lumen	CC
GO:0071840	cellular component organization or biogenesis	BP
GO:1990904	ribonucleoprotein complex	CC