Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Poman.06G126400.v1.1
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Position
Chr06:12412029-12423333 (-)
11304bp
Gene Type
gene
Gene Description (Protein Product)
Lycopene epsilon cyclase
Organism
Populus nigra x maximowiczii
Also AS Poman.06G126400AT5G57030Potri.006G147300.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Poman.16G030200.v1.1 Lycopene beta cyclase
Poman.13G034900.v1.1 Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
Poman.13G047700.v1.1 Belongs to the calycin superfamily. Lipocalin family
Regulatory gene
Poman.01G004300.v1.1 ethylene-responsive transcription factor
Poman.01G011600.v1.1 Bromodomain-containing protein
Poman.01G041800.v1.1 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0006629 lipid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008299 isoprenoid biosynthetic process BP
GO:0008610 lipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009975 cyclase activity MF
GO:0009987 cellular process BP
GO:0016108 tetraterpenoid metabolic process BP
GO:0016109 tetraterpenoid biosynthetic process BP
GO:0016114 terpenoid biosynthetic process BP
GO:0016116 carotenoid metabolic process BP
GO:0016117 carotenoid biosynthetic process BP
GO:0016122 xanthophyll metabolic process BP
GO:0016123 xanthophyll biosynthetic process BP
GO:0016853 isomerase activity MF
GO:0016860 intramolecular oxidoreductase activity MF
GO:0042440 pigment metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0045435 lycopene epsilon cyclase activity MF
GO:0046148 pigment biosynthetic process BP
GO:0071704 organic substance metabolic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00906 Carotenoid biosynthesis -