Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Poman.09G034300.v1.1
View in Genome Browser
Position
Chr09:5314722-5319586 (+)
4864bp
Gene Type
gene
Gene Description (Protein Product)
Phosphomethylpyrimidine synthase
Organism
Populus nigra x maximowiczii
Also AS Poman.09G034300AT2G29630Potri.009G043200.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Poman.13G040600.v1.1 Phosphoribosylaminoimidazole carboxylase
Poman.14G098000.v1.1 Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic mitochondrial-like
Poman.19G018100.v1.1 Phosphoribosylaminoimidazole carboxylase
Regulatory gene
Poman.01G017300.v1.1 basic region leucin zipper
Poman.01G025700.v1.1 transcription factor
Poman.01G066100.v1.1 -

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006766 vitamin metabolic process BP
GO:0006767 water-soluble vitamin metabolic process BP
GO:0006772 thiamine metabolic process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007584 response to nutrient BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009110 vitamin biosynthetic process BP
GO:0009228 thiamine biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010033 response to organic substance BP
GO:0010243 response to organonitrogen compound BP
GO:0010266 response to vitamin B1 BP
GO:0014070 response to organic cyclic compound BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0017144 xenobiotic metabolic process BP
GO:0018130 heterocycle biosynthetic process BP
GO:0019144 ADP-sugar diphosphatase activity MF
GO:0019438 aromatic compound biosynthetic process BP
GO:0019904 protein domain specific binding MF
GO:0031667 response to nutrient levels BP
GO:0033273 response to vitamin BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042221 response to chemical BP
GO:0042364 water-soluble vitamin biosynthetic process BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042723 thiamine-containing compound metabolic process BP
GO:0042724 thiamine-containing compound biosynthetic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044272 sulfur compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0048037 obsolete cofactor binding MF
GO:0050896 response to stimulus BP
GO:0051536 iron-sulfur cluster binding MF
GO:0051540 metal cluster binding MF
GO:0071704 organic substance metabolic process BP
GO:0072527 pyrimidine-containing compound metabolic process BP
GO:0072528 pyrimidine-containing compound biosynthetic process BP
GO:0080041 ADP-ribose pyrophosphohydrolase activity MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901698 response to nitrogen compound BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00730 Thiamine metabolism -