PPGR - Gene Detail

Basic Information

Gene ID	Poman.12G083700.v1.1 View in Genome Browser
Position	Chr12:12063293-12074638 (-) 11345bp
Gene Type	gene
Gene Description (Protein Product)	Lysosomal alpha-mannosidase-like
Organism	Populus nigra x maximowiczii
Also AS	Poman.12G083700AT5G13980Potri.012G106500.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Poman.14G117500.v1.1 Lysosomal

Poman.17G024600.v1.1 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

Poman.17G024600.v1.1 Ubiquitin family

Regulatory gene

Poman.01G051300.v1.1 MADS-box protein

Poman.01G051400.v1.1 Agamous-like MADS-box protein AGL9 homolog

Poman.01G073600.v1.1 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000323	lytic vacuole	CC
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005764	lysosome	CC
GO:0005773	vacuole	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC

KEGG Term	Name	Description
map00511	Other glycan degradation	-