Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Poman.12G099200.v1.1
View in Genome Browser
Position
Chr12:13362309-13366299 (+)
3990bp
Gene Type
gene
Gene Description (Protein Product)
Protein LOW PSII ACCUMULATION 2
Organism
Populus nigra x maximowiczii
Also AS Poman.12G099200AT5G51545Potri.012G128000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Poman.18G081900.v1.1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
Poman.13G019700.v1.1 Domain of unknown function (DUF1995)
Poman.14G083100.v1.1 kDa ribonucleoprotein
Regulatory gene
Poman.01G015800.v1.1 AP2-like ethylene-responsive transcription factor
Poman.01G035500.v1.1 AP2-like ethylene-responsive transcription factor
Poman.01G051300.v1.1 MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC