Basic Information
Gene ID
Poman.16G058000.v1.1
Position
Chr16:5265851-5266900 (+)
1049bp
Gene Type
gene
Gene Description (Protein Product)
"Succinyl-CoA synthetase functions in the citric acid cycle (TCA)
Organism
Also AS Poman.16G058000AT5G08300Potri.016G071850.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Poman.16G071500.v1.1 Citrate synthase
Poman.17G057700.v1.1 Pyruvate dehydrogenase E1 component subunit
Poman.16G072900.v1.1 Isocitrate dehydrogenase (NAD

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00660 C5-Branched dibasic acid metabolism -
map00640 Propanoate metabolism -
map00020 Citrate cycle (TCA cycle) The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].