PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	Poman.17G039800.v1.1 View in Genome Browser
Position	Chr17:4496560-4502161 (+) 5601bp
Gene Type	gene
Gene Description (Protein Product)	High mobility group B protein
Organism	Populus nigra x maximowiczii
Also AS	Poman.17G039800AT1G04880Potri.017G055200.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Poman.17G048800.v1.1 SWI SNF complex component SNF12 homolog

Poman.19G016500.v1.1 Belongs to the actin family

Poman.18G098800.v1.1 Belongs to the actin family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000217	DNA secondary structure binding	MF
GO:0000400	four-way junction DNA binding	MF
GO:0000902	cell morphogenesis	BP
GO:0000904	cell morphogenesis involved in differentiation	BP
GO:0001067	transcription regulatory region nucleic acid binding	MF
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003700	DNA-binding transcription factor activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0006082	organic acid metabolic process	BP
GO:0006355	regulation of DNA-templated transcription	BP
GO:0006790	sulfur compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008134	transcription factor binding	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009826	unidimensional cell growth	BP
GO:0009846	pollen germination	BP
GO:0009856	pollination	BP
GO:0009860	pollen tube growth	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009932	cell tip growth	BP
GO:0009987	cellular process	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0016043	cellular component organization	BP
GO:0016049	cell growth	BP
GO:0016143	S-glycoside metabolic process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0019748	secondary metabolic process	BP
GO:0019757	glycosinolate metabolic process	BP
GO:0019760	glucosinolate metabolic process	BP
GO:0022414	reproductive process	BP
GO:0030154	cell differentiation	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032989	cellular component morphogenesis	BP
GO:0040007	growth	BP
GO:0042995	cell projection	CC
GO:0043436	oxoacid metabolic process	BP
GO:0043565	sequence-specific DNA binding	MF
GO:0044212	transcription cis-regulatory region binding	MF
GO:0044237	cellular metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044464	obsolete cell part	CC
GO:0044706	multi-multicellular organism process	BP
GO:0048468	cell development	BP
GO:0048588	developmental cell growth	BP
GO:0048589	developmental growth	BP
GO:0048856	anatomical structure development	BP
GO:0048868	pollen tube development	BP
GO:0048869	cellular developmental process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0051704	obsolete multi-organism process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0060560	developmental growth involved in morphogenesis	BP
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0090406	pollen tube	CC
GO:0097159	organic cyclic compound binding	MF
GO:0120025	plasma membrane bounded cell projection	CC
GO:0140110	transcription regulator activity	MF
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901657	glycosyl compound metabolic process	BP
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP