Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene00185
View in Genome Browser
Position
hic_scaffold_15:54578585-54582086 (+)
3501bp
Gene Type
gene
Gene Description (Protein Product)
GAGA binding protein-like family
Organism
Phyllostachys edulis
Also AS AT5G42520

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene20048 Chromo (CHRromatin Organisation MOdifier) domain
PH02Gene29846 Chromo (CHRromatin Organisation MOdifier) domain
PH02Gene23445 DNA-binding transcription factor activity
Regulatory gene
PH02Gene00304 Dof domain, zinc finger
PH02Gene00562 Dof domain, zinc finger
PH02Gene01470 transcription factor
Target gene
PH02Gene00002
PH02Gene00023 U2 small nuclear ribonucleoprotein B''
PH02Gene00030 Domain of unknown function (DUF4228)

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005730 nucleolus CC
GO:0008150 biological_process BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0010033 response to organic substance BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0042221 response to chemical BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043565 sequence-specific DNA binding MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046983 protein dimerization activity MF
GO:0050896 response to stimulus BP
GO:0070013 intracellular organelle lumen CC
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF