Basic Information
Gene ID
Position
hic_scaffold_16:89291797-89294034 (+)
2237bp
Gene Type
gene
Gene Description (Protein Product)
Late embryogenesis abundant protein
Organism
Also AS AT4G02380

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene40657 late embryogenesis abundant protein
PH02Gene29650 Ethylene-responsive protein kinase Le-CTR1
PH02Gene49297 Senescence regulator
Regulatory gene
PH02Gene00094 Lateral organ boundaries (LOB) domain
PH02Gene00622 B3 domain-containing protein
PH02Gene00718 Histone-lysine N-methyltransferase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000302 response to reactive oxygen species BP
GO:0001101 response to acid chemical BP
GO:0002831 regulation of response to biotic stimulus BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005829 cytosol CC
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0006979 response to oxidative stress BP
GO:0007154 cell communication BP
GO:0007275 multicellular organism development BP
GO:0007568 aging BP
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009314 response to radiation BP
GO:0009409 response to cold BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009416 response to light stimulus BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009611 response to wounding BP
GO:0009620 response to fungus BP
GO:0009625 response to insect BP
GO:0009628 response to abiotic stimulus BP
GO:0009636 response to toxic substance BP
GO:0009642 response to light intensity BP
GO:0009646 response to absence of light BP
GO:0009651 response to salt stress BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010150 leaf senescence BP
GO:0022622 root system development BP
GO:0031347 regulation of defense response BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0032101 regulation of response to external stimulus BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033554 cellular response to stress BP
GO:0033993 response to lipid BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042542 response to hydrogen peroxide BP
GO:0042631 cellular response to water deprivation BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043900 obsolete regulation of multi-organism process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046677 response to antibiotic BP
GO:0048364 root development BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048580 regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050896 response to stimulus BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071229 cellular response to acid chemical BP
GO:0071462 cellular response to water stimulus BP
GO:0071496 cellular response to external stimulus BP
GO:0080134 regulation of response to stress BP
GO:0090693 plant organ senescence BP
GO:0097305 response to alcohol BP
GO:0099402 plant organ development BP
GO:0104004 cellular response to environmental stimulus BP
GO:1900055 regulation of leaf senescence BP
GO:1900150 regulation of defense response to fungus BP
GO:1900424 regulation of defense response to bacterium BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1902074 response to salt BP
GO:2000024 regulation of leaf development BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000028 regulation of photoperiodism, flowering BP
GO:2000241 regulation of reproductive process BP