Basic Information
Gene ID
Position
hic_scaffold_17:9220-12984 (-)
3764bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the small GTPase superfamily. Rho family
Organism
Also AS AT4G35020

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene28770 Prenyltransferase and squalene oxidase repeat
PH02Gene47314 Prenyltransferase and squalene oxidase repeat
PH02Gene40592 Belongs to the Rab GDI family
Regulatory gene
PH02Gene00304 Dof domain, zinc finger
PH02Gene00562 Dof domain, zinc finger
PH02Gene00622 B3 domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.