Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene28158
View in Genome Browser
Position
hic_scaffold_8:26926764-26954746 (+)
27982bp
Gene Type
gene
Gene Description (Protein Product)
"atatg2
Organism
Phyllostachys edulis
Also AS AT3G19190

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene40863 Ubiquitin-like modifier-activating enzyme ATG7 N-terminus
PH02Gene31140 Required for autophagy
PH02Gene46341 Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000045 autophagosome assembly BP
GO:0002376 immune system process BP
GO:0006914 autophagy BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0006996 organelle organization BP
GO:0007033 vacuole organization BP
GO:0007275 multicellular organism development BP
GO:0007568 aging BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009620 response to fungus BP
GO:0009814 defense response to other organism BP
GO:0009816 defense response to bacterium BP
GO:0009987 cellular process BP
GO:0010150 leaf senescence BP
GO:0016043 cellular component organization BP
GO:0016236 macroautophagy BP
GO:0022607 cellular component assembly BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0042742 defense response to bacterium BP
GO:0043207 response to external biotic stimulus BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0045087 innate immune response BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0050832 defense response to fungus BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0070925 organelle assembly BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090693 plant organ senescence BP
GO:0098542 defense response to other organism BP
GO:0099402 plant organ development BP
GO:1905037 autophagosome organization BP