Basic Information
Gene ID
Position
hic_scaffold_20:17727493-17729936 (-)
2443bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the small GTPase superfamily. Rho family
Organism
Also AS AT4G35020

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene28770 Prenyltransferase and squalene oxidase repeat
PH02Gene47314 Prenyltransferase and squalene oxidase repeat
PH02Gene40592 Belongs to the Rab GDI family
Regulatory gene
PH02Gene00440 DNA binding
PH02Gene00602 No apical meristem (NAM) protein
PH02Gene00821 NAC domain-containing protein 94

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0016020 membrane CC
GO:0044464 obsolete cell part CC
GO:0071944 cell periphery CC
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.