Basic Information
Gene ID
Position
hic_scaffold_14:34252319-34254536 (+)
2217bp
Gene Type
gene
Gene Description (Protein Product)
"Acyl-CoA dehydrogenase
Organism
Also AS AT3G51840

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene29111 Belongs to the enoyl-CoA hydratase isomerase family
PH02Gene32530 Aldehyde dehydrogenase family
PH02Gene50127 Belongs to the enoyl-CoA hydratase isomerase family
Regulatory gene
PH02Gene00452 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
PH02Gene00810 Helix-loop-helix DNA-binding domain
PH02Gene00899 Helix-loop-helix DNA-binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04146 Peroxisome Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map01040 Biosynthesis of unsaturated fatty acids -
map00640 Propanoate metabolism -
map00592 alpha-Linolenic acid metabolism -
map00410 beta-Alanine metabolism -
map00071 Fatty acid metabolism -