Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene34530
View in Genome Browser
Position
hic_scaffold_24:48654905-48657071 (+)
2166bp
Gene Type
gene
Gene Description (Protein Product)
organic cation transport
Organism
Phyllostachys edulis
Also AS AT4G13510

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene48468 protein Sb04g004280 source
PH02Gene34667 Ubiquitin-2 like Rad60 SUMO-like
PH02Gene36353 protein Sb04g004280 source
Regulatory gene
PH02Gene00769 TCP family transcription factor
PH02Gene01234 HSF-type DNA-binding
PH02Gene03550 Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0005887 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0008519 ammonium transmembrane transporter activity MF
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015695 organic cation transport BP
GO:0015696 ammonium transmembrane transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0022857 transmembrane transporter activity MF
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0034220 monoatomic ion transmembrane transport BP
GO:0044425 obsolete membrane part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055085 transmembrane transport BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071944 cell periphery CC
GO:0072488 ammonium transmembrane transport BP
GO:0098655 monoatomic cation transmembrane transport BP