Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene35481
View in Genome Browser
Position
hic_scaffold_20:40573123-40574936 (+)
1813bp
Gene Type
gene
Gene Description (Protein Product)
Lycopene cyclase protein
Organism
Phyllostachys edulis
Also AS AT3G10230

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene46733 Lycopene cyclase protein
PH02Gene42507 Converts zeaxanthin into antheraxanthin and subsequently violaxanthin
PH02Gene44903 Domain of unknown function (DUF4033)
Regulatory gene
PH02Gene00239 zinc finger
PH02Gene00552 Zinc-finger double-stranded RNA-binding
PH02Gene00687 Domain of unknown function (DUF966)

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00906 Carotenoid biosynthesis -
map00906 Carotenoid biosynthesis -