PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	PH02Gene35701 View in Genome Browser
Position	hic_scaffold_11:6467766-6469378 (-) 1612bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family
Organism	Phyllostachys edulis
Also AS	AT5G54160

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	PH02Gene41827 Belongs to the cytochrome P450 family PH02Gene36971 Belongs to the cytochrome P450 family PH02Gene35876 Belongs to the chalcone isomerase family
Regulatory gene	PH02Gene00094 Lateral organ boundaries (LOB) domain PH02Gene00718 Histone-lysine N-methyltransferase PH02Gene00783 tesmin TSO1-like CXC

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008168	methyltransferase activity	MF
GO:0008171	O-methyltransferase activity	MF
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0016740	transferase activity	MF
GO:0016741	transferase activity, transferring one-carbon groups	MF
GO:0019438	aromatic compound biosynthetic process	BP
GO:0032259	methylation	BP
GO:0044237	cellular metabolic process	BP
GO:0044249	cellular biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map00941	Flavonoid biosynthesis	Flavonoids are a major class of plant secondary metabolites that serves a multitude of functions including pigments and antioxidant activity. Flavonoids are synthesized from phenylpropanoid derivatives by condensation with malonyl-CoA. For example, condensation of p-coumaroyl-CoA (C6-C3) with three malonyl-CoA (C3) molecules results in naringenin chalcone with a diphenylpropane (C6-C3-C6) unit, which is converted to naringenin with the flavone (2-phenylchromen-4-one) backbone by conjugate ring closure. These and further modifications yield a variety of structural forms including chalcones, flavanones, dihyroflavonols, and flavans, anthocyanins, flavones and flavonols, and isoflavonoids.