PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	PH02Gene37523 View in Genome Browser
Position	hic_scaffold_14:71566504-71573233 (+) 6729bp
Gene Type	gene
Gene Description (Protein Product)	Transmembrane amino acid transporter protein
Organism	Phyllostachys edulis
Also AS	AT2G38120

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	PH02Gene46624 Transmembrane amino acid transporter protein PH02Gene38868 Transport inhibitor response 1-like protein Os05g0150500 PH02Gene48468 protein Sb04g004280 source
Regulatory gene	PH02Gene00304 Dof domain, zinc finger PH02Gene00562 Dof domain, zinc finger PH02Gene01505 dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003333	amino acid transmembrane transport	BP
GO:0003674	molecular_function	MF
GO:0005215	transporter activity	MF
GO:0005342	organic acid transmembrane transporter activity	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0006355	regulation of DNA-templated transcription	BP
GO:0006810	transport	BP
GO:0006811	monoatomic ion transport	BP
GO:0006820	monoatomic anion transport	BP
GO:0006865	amino acid transport	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008509	monoatomic anion transmembrane transporter activity	MF
GO:0008514	organic anion transmembrane transporter activity	MF
GO:0009889	regulation of biosynthetic process	BP
GO:0009891	positive regulation of biosynthetic process	BP
GO:0009893	positive regulation of metabolic process	BP
GO:0009914	hormone transport	BP
GO:0010328	auxin influx transmembrane transporter activity	MF
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0010557	positive regulation of macromolecule biosynthetic process	BP
GO:0010604	positive regulation of macromolecule metabolic process	BP
GO:0010628	positive regulation of gene expression	BP
GO:0010817	regulation of hormone levels	BP
GO:0015075	monoatomic ion transmembrane transporter activity	MF
GO:0015171	amino acid transmembrane transporter activity	MF
GO:0015318	inorganic molecular entity transmembrane transporter activity	MF
GO:0015711	organic anion transport	BP
GO:0015849	organic acid transport	BP
GO:0016020	membrane	CC
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0022603	regulation of anatomical structure morphogenesis	BP
GO:0022622	root system development	BP
GO:0022857	transmembrane transporter activity	MF
GO:0031323	regulation of cellular metabolic process	BP
GO:0031325	positive regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0031328	positive regulation of cellular biosynthetic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0034220	monoatomic ion transmembrane transport	BP
GO:0044464	obsolete cell part	CC
GO:0045893	positive regulation of DNA-templated transcription	BP
GO:0045935	positive regulation of nucleobase-containing compound metabolic process	BP
GO:0046942	carboxylic acid transport	BP
GO:0046943	carboxylic acid transmembrane transporter activity	MF
GO:0048364	root development	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048731	system development	BP
GO:0048829	root cap development	BP
GO:0048831	regulation of shoot system development	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050793	regulation of developmental process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051173	positive regulation of nitrogen compound metabolic process	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051239	regulation of multicellular organismal process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0051254	positive regulation of RNA metabolic process	BP
GO:0055085	transmembrane transport	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0060688	regulation of morphogenesis of a branching structure	BP
GO:0060918	auxin transport	BP
GO:0060919	auxin import into cell	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071702	organic substance transport	BP
GO:0071705	nitrogen compound transport	BP
GO:0071944	cell periphery	CC
GO:0080090	regulation of primary metabolic process	BP
GO:0080161	auxin transmembrane transporter activity	MF
GO:0098656	monoatomic anion transmembrane transport	BP
GO:0099402	plant organ development	BP
GO:1900618	regulation of shoot system morphogenesis	BP
GO:1902680	positive regulation of RNA biosynthetic process	BP
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:1903508	positive regulation of nucleic acid-templated transcription	BP
GO:1903825	organic acid transmembrane transport	BP
GO:1905039	carboxylic acid transmembrane transport	BP
GO:1905428	regulation of plant organ formation	BP
GO:2000026	regulation of multicellular organismal development	BP
GO:2000032	regulation of secondary shoot formation	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP

KEGG Term	Name	Description
map04075	Plant hormone signal transduction	-