Basic Information
Gene ID
Position
hic_scaffold_4:13851512-13851972 (-)
460bp
Gene Type
gene
Gene Description (Protein Product)
Small ubiquitinrelated modifier
Organism
Also AS AT5G55856

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene37854 Ubiquitin-2 like Rad60 SUMO-like
PH02Gene39411 WD40 repeats
PH02Gene45161 Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Regulatory gene
PH02Gene00867 bZIP transcription factor
PH02Gene02360 Basic region leucine zipper
PH02Gene02402 basic region leucin zipper

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.