Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene39236
View in Genome Browser
Position
hic_scaffold_23:79808442-79810173 (+)
1731bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Organism
Phyllostachys edulis
Also AS AT2G45630

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene47370 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PH02Gene40200 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PH02Gene43926 Belongs to the isocitrate lyase PEP mutase superfamily. Isocitrate lyase family
Regulatory gene
PH02Gene01001 ethylene-responsive transcription factor
PH02Gene01222 AP2 domain
PH02Gene01223 AP2 domain

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00630 Glyoxylate and dicarboxylate metabolism -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].