Basic Information
Gene ID
Position
hic_scaffold_14:41975090-41981303 (+)
6213bp
Gene Type
gene
Gene Description (Protein Product)
"WD domain
Organism
Also AS AT1G80670

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene44158 Nuclear pore complex protein
PH02Gene47107 WD domain, G-beta repeat
PH02Gene41831 Nucleoporin complex subunit 54
Regulatory gene
PH02Gene00452 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
PH02Gene01001 ethylene-responsive transcription factor
PH02Gene01037 DNA-binding domain in plant proteins such as APETALA2 and EREBPs

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.