Basic Information
Gene ID
Position
hic_scaffold_17:31568383-31568784 (+)
401bp
Gene Type
gene
Gene Description (Protein Product)
Phenylalanine ammonia-lyase
Organism
Also AS AT2G37040

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene46256 Prephenate dehydrogenase
PH02Gene42739 AMP-binding enzyme C-terminal domain
PH02Gene44530 Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine
Regulatory gene
PH02Gene00315 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PH02Gene00628 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PH02Gene00986 Myb-like DNA-binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00940 Phenylpropanoid biosynthesis Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.
map00360 Phenylalanine metabolism -