Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene40511
View in Genome Browser
Position
hic_scaffold_20:2954840-2958581 (+)
3741bp
Gene Type
gene
Gene Description (Protein Product)
LITAF-like zinc ribbon domain
Organism
Phyllostachys edulis
Also AS AT5G13190

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene43759 belongs to the protein kinase superfamily
PH02Gene44375 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PH02Gene49628 Aldo/keto reductase family
Regulatory gene
PH02Gene00304 Dof domain, zinc finger
PH02Gene00562 Dof domain, zinc finger
PH02Gene00622 B3 domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002682 regulation of immune system process BP
GO:0002683 negative regulation of immune system process BP
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0008150 biological_process BP
GO:0010363 regulation of plant-type hypersensitive response BP
GO:0010941 regulation of cell death BP
GO:0016020 membrane CC
GO:0031347 regulation of defense response BP
GO:0031348 negative regulation of defense response BP
GO:0034051 negative regulation of plant-type hypersensitive response BP
GO:0043067 regulation of programmed cell death BP
GO:0043069 negative regulation of programmed cell death BP
GO:0044464 obsolete cell part CC
GO:0045088 regulation of innate immune response BP
GO:0045824 negative regulation of innate immune response BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0050776 regulation of immune response BP
GO:0050777 negative regulation of immune response BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0060548 negative regulation of cell death BP
GO:0065007 biological regulation BP
GO:0071944 cell periphery CC
GO:0080134 regulation of response to stress BP
GO:0080135 regulation of cellular response to stress BP