Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene41572
View in Genome Browser
Position
hic_scaffold_13:43381666-43389599 (-)
7933bp
Gene Type
gene
Gene Description (Protein Product)
RNA recognition motif
Organism
Phyllostachys edulis
Also AS AT1G11650

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene51011 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PH02Gene46641 At4g28440-like
PH02Gene44005 zinc finger CCCH domain-containing protein
Regulatory gene
PH02Gene01001 ethylene-responsive transcription factor
PH02Gene01222 AP2 domain
PH02Gene01223 AP2 domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000302 response to reactive oxygen species BP
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003727 single-stranded RNA binding MF
GO:0003729 mRNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0008143 poly(A) binding MF
GO:0008150 biological_process BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009735 response to cytokinin BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010193 response to ozone BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046677 response to antibiotic BP
GO:0050896 response to stimulus BP
GO:0070717 poly-purine tract binding MF
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901700 response to oxygen-containing compound BP