Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene42632
View in Genome Browser
Position
hic_scaffold_20:37538327-37543183 (+)
4856bp
Gene Type
gene
Gene Description (Protein Product)
Core-2/I-Branching enzyme
Organism
Phyllostachys edulis
Also AS AT5G39990

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene46301 Catalyzes the ferrous insertion into protoporphyrin IX
PH02Gene50927 PhoD-like phosphatase
PH02Gene50240 Glutamate-gated receptor that probably acts as non- selective cation channel
Regulatory gene
PH02Gene00304 Dof domain, zinc finger
PH02Gene00562 Dof domain, zinc finger
PH02Gene01001 ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0006029 proteoglycan metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009100 glycoprotein metabolic process BP
GO:0009101 glycoprotein biosynthetic process BP
GO:0009987 cellular process BP
GO:0015012 heparan sulfate proteoglycan biosynthetic process BP
GO:0019538 protein metabolic process BP
GO:0030166 proteoglycan biosynthetic process BP
GO:0030201 heparan sulfate proteoglycan metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0043170 macromolecule metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0050650 chondroitin sulfate proteoglycan biosynthetic process BP
GO:0050654 chondroitin sulfate proteoglycan metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP