Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene43960
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Position
hic_scaffold_15:17410500-17413794 (+)
3294bp
Gene Type
gene
Gene Description (Protein Product)
Cupin domain
Organism
Phyllostachys edulis
Also AS AT3G62020

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene45437 GPI-anchored protein
PH02Gene49291 Filament-like plant protein, long coiled-coil
PH02Gene44669 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Regulatory gene
PH02Gene00233 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PH02Gene00304 Dof domain, zinc finger
PH02Gene00315 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005911 cell-cell junction CC
GO:0006810 transport BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009506 plasmodesma CC
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0010496 intercellular transport BP
GO:0010497 plasmodesmata-mediated intercellular transport BP
GO:0030054 cell junction CC
GO:0030312 external encapsulating structure CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051239 regulation of multicellular organismal process BP
GO:0055044 symplast CC
GO:0065007 biological regulation BP
GO:0071944 cell periphery CC
GO:2000026 regulation of multicellular organismal development BP
GO:2000280 regulation of root development BP