Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene44294
View in Genome Browser
Position
hic_scaffold_13:80644555-80647538 (-)
2983bp
Gene Type
gene
Gene Description (Protein Product)
Fasciclin domain
Organism
Phyllostachys edulis
Also AS AT4G12730

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene49919 Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
PH02Gene46714 Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain
PH02Gene45271 Putative S-adenosyl-L-methionine-dependent methyltransferase
Regulatory gene
PH02Gene00304 Dof domain, zinc finger
PH02Gene00452 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
PH02Gene00562 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005886 plasma membrane CC
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0016020 membrane CC
GO:0022622 root system development BP
GO:0030312 external encapsulating structure CC
GO:0031090 organelle membrane CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031225 obsolete anchored component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0046658 obsolete anchored component of plasma membrane CC
GO:0048364 root development BP
GO:0048367 shoot system development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0071944 cell periphery CC
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:0099402 plant organ development BP