PPGR - Gene Detail

Basic Information

Gene ID	PH02Gene44801 View in Genome Browser
Position	hic_scaffold_23:72920785-72933021 (-) 12236bp
Gene Type	gene
Gene Description (Protein Product)	belongs to the protein kinase superfamily
Organism	Phyllostachys edulis
Also AS	AT1G16670

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

PH02Gene45281 Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism

PH02Gene45282 Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism

PH02Gene49541 Protein kinase domain

Regulatory gene

PH02Gene00233 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

PH02Gene00304 Dof domain, zinc finger

PH02Gene00349 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0002237	response to molecule of bacterial origin	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004672	protein kinase activity	MF
GO:0004674	protein serine/threonine kinase activity	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0006464	protein modification process	BP
GO:0006468	protein phosphorylation	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009266	response to temperature stimulus	BP
GO:0009409	response to cold	BP
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009617	response to bacterium	BP
GO:0009625	response to insect	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0016020	membrane	CC
GO:0016301	kinase activity	MF
GO:0016310	phosphorylation	BP
GO:0016740	transferase activity	MF
GO:0016772	transferase activity, transferring phosphorus-containing groups	MF
GO:0016773	phosphotransferase activity, alcohol group as acceptor	MF
GO:0019538	protein metabolic process	BP
GO:0032386	regulation of intracellular transport	BP
GO:0032388	positive regulation of intracellular transport	BP
GO:0032879	regulation of localization	BP
GO:0032880	regulation of protein localization	BP
GO:0033157	regulation of intracellular protein transport	BP
GO:0033158	obsolete regulation of protein import into nucleus, translocation	BP
GO:0033160	obsolete positive regulation of protein import into nucleus, translocation	BP
GO:0036211	protein modification process	BP
GO:0042221	response to chemical	BP
GO:0042306	regulation of protein import into nucleus	BP
GO:0042307	positive regulation of protein import into nucleus	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043207	response to external biotic stimulus	BP
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044464	obsolete cell part	CC
GO:0046777	protein autophosphorylation	BP
GO:0046822	regulation of nucleocytoplasmic transport	BP
GO:0046824	positive regulation of nucleocytoplasmic transport	BP
GO:0048518	positive regulation of biological process	BP
GO:0050789	regulation of biological process	BP
GO:0050826	response to freezing	BP
GO:0050896	response to stimulus	BP
GO:0051049	regulation of transport	BP
GO:0051050	positive regulation of transport	BP
GO:0051222	positive regulation of protein transport	BP
GO:0051223	regulation of protein transport	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0060341	regulation of cellular localization	BP
GO:0065007	biological regulation	BP
GO:0070201	regulation of establishment of protein localization	BP
GO:0071704	organic substance metabolic process	BP
GO:0071944	cell periphery	CC
GO:0090087	regulation of peptide transport	BP
GO:0090316	positive regulation of intracellular protein transport	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1900180	regulation of protein localization to nucleus	BP
GO:1900182	positive regulation of protein localization to nucleus	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1903827	regulation of protein localization	BP
GO:1903829	positive regulation of protein localization	BP
GO:1904589	regulation of protein import	BP
GO:1904591	positive regulation of protein import	BP
GO:1904951	positive regulation of establishment of protein localization	BP