Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene45022
View in Genome Browser
Position
hic_scaffold_21:54584586-54597340 (+)
12754bp
Gene Type
gene
Gene Description (Protein Product)
Vps52 / Sac2 family
Organism
Phyllostachys edulis
Also AS AT1G71270

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
PH02Gene00315 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PH02Gene00602 No apical meristem (NAM) protein
PH02Gene00628 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000139 Golgi membrane CC
GO:0000149 SNARE binding MF
GO:0000902 cell morphogenesis BP
GO:0000904 cell morphogenesis involved in differentiation BP
GO:0000938 GARP complex CC
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0006810 transport BP
GO:0006892 post-Golgi vesicle-mediated transport BP
GO:0006896 Golgi to vacuole transport BP
GO:0007034 vacuolar transport BP
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009826 unidimensional cell growth BP
GO:0009856 pollination BP
GO:0009860 pollen tube growth BP
GO:0009932 cell tip growth BP
GO:0009987 cellular process BP
GO:0010008 endosome membrane CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0016192 vesicle-mediated transport BP
GO:0016197 endosomal transport BP
GO:0016482 cytosolic transport BP
GO:0017016 small GTPase binding MF
GO:0017137 small GTPase binding MF
GO:0019899 enzyme binding MF
GO:0019905 syntaxin binding MF
GO:0019953 sexual reproduction BP
GO:0022414 reproductive process BP
GO:0030154 cell differentiation BP
GO:0031090 organelle membrane CC
GO:0031267 small GTPase binding MF
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032456 endocytic recycling BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032588 trans-Golgi network membrane CC
GO:0032989 cellular component morphogenesis BP
GO:0032991 protein-containing complex CC
GO:0040007 growth BP
GO:0042147 retrograde transport, endosome to Golgi BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0044706 multi-multicellular organism process BP
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0048468 cell development BP
GO:0048588 developmental cell growth BP
GO:0048589 developmental growth BP
GO:0048856 anatomical structure development BP
GO:0048868 pollen tube development BP
GO:0048869 cellular developmental process BP
GO:0051020 GTPase binding MF
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051704 obsolete multi-organism process BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0098805 membrane CC
GO:0099023 vesicle tethering complex CC