Basic Information
Gene ID
Position
hic_scaffold_1:16417333-16417798 (+)
465bp
Gene Type
gene
Gene Description (Protein Product)
"starch synthase 3
Organism
Also AS

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene50121 4-alpha-glucanotransferase
PH02Gene47805 Belongs to the glycosyltransferase 1 family. Bacterial plant glycogen synthase subfamily
PH02Gene45438 Belongs to the hexokinase family
Regulatory gene
PH02Gene00094 Lateral organ boundaries (LOB) domain
PH02Gene00233 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PH02Gene00304 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0010021 amylopectin biosynthetic process BP
GO:0042802 identical protein binding MF
GO:0043170 macromolecule metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:2000896 amylopectin metabolic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00500 Starch and sucrose metabolism -