Basic Information
Gene ID
Position
hic_scaffold_23:76686714-76689022 (+)
2308bp
Gene Type
gene
Gene Description (Protein Product)
serine threonine-protein kinase
Organism
Also AS AT3G48190

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene49255 Crossover junction endonuclease MUS81
PH02Gene47669 DNA polymerase subunit Cdc27
PH02Gene48245 DNA polymerase
Regulatory gene
PH02Gene00094 Lateral organ boundaries (LOB) domain
PH02Gene00239 zinc finger
PH02Gene00304 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03440 Homologous recombination Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.