Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene46732
View in Genome Browser
Position
hic_scaffold_16:65373015-65373618 (-)
603bp
Gene Type
gene
Gene Description (Protein Product)
Shikimate / quinate 5-dehydrogenase
Organism
Phyllostachys edulis
Also AS AT4G29120

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene47370 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PH02Gene50233 Removes the phosphate from trehalose 6-phosphate to produce free trehalose
PH02Gene48692 Acyl-CoA dehydrogenase, N-terminal domain
Regulatory gene
PH02Gene00094 Lateral organ boundaries (LOB) domain
PH02Gene00718 Histone-lysine N-methyltransferase
PH02Gene01001 ethylene-responsive transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC