Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene48008
View in Genome Browser
Position
hic_scaffold_12:17391530-17401716 (-)
10186bp
Gene Type
gene
Gene Description (Protein Product)
Transmembrane amino acid transporter protein
Organism
Phyllostachys edulis
Also AS AT5G40780

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene50687 EF-hand domain
PH02Gene48423 EF-hand domain
PH02Gene48238 Peptidyl-prolyl cis-trans isomerase
Regulatory gene
PH02Gene00094 Lateral organ boundaries (LOB) domain
PH02Gene00182 Belongs to the GRAS family
PH02Gene00304 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003333 amino acid transmembrane transport BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005342 organic acid transmembrane transporter activity MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006820 monoatomic anion transport BP
GO:0006865 amino acid transport BP
GO:0008150 biological_process BP
GO:0008509 monoatomic anion transmembrane transporter activity MF
GO:0008514 organic anion transmembrane transporter activity MF
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015171 amino acid transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015711 organic anion transport BP
GO:0015849 organic acid transport BP
GO:0016020 membrane CC
GO:0022857 transmembrane transporter activity MF
GO:0034220 monoatomic ion transmembrane transport BP
GO:0044464 obsolete cell part CC
GO:0046942 carboxylic acid transport BP
GO:0046943 carboxylic acid transmembrane transporter activity MF
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055085 transmembrane transport BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071944 cell periphery CC
GO:0098656 monoatomic anion transmembrane transport BP
GO:1903825 organic acid transmembrane transport BP
GO:1905039 carboxylic acid transmembrane transport BP