Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene48725
View in Genome Browser
Position
hic_scaffold_20:18218235-18223120 (-)
4885bp
Gene Type
gene
Gene Description (Protein Product)
DnaJ C terminal domain
Organism
Phyllostachys edulis
Also AS AT2G20560

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene50785 RING-like zinc finger
Regulatory gene
PH02Gene00304 Dof domain, zinc finger
PH02Gene00562 Dof domain, zinc finger
PH02Gene00602 No apical meristem (NAM) protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000226 microtubule cytoskeleton organization BP
GO:0001578 microtubule bundle formation BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005856 cytoskeleton CC
GO:0005929 cilium CC
GO:0005930 axoneme CC
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0022607 cellular component assembly BP
GO:0030030 cell projection organization BP
GO:0030031 cell projection assembly BP
GO:0031514 motile cilium CC
GO:0032838 plasma membrane bounded cell projection cytoplasm CC
GO:0035082 axoneme assembly BP
GO:0036126 sperm flagellum CC
GO:0042995 cell projection CC
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044441 obsolete ciliary part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044463 obsolete cell projection part CC
GO:0044464 obsolete cell part CC
GO:0044782 cilium organization BP
GO:0060271 cilium assembly BP
GO:0070925 organelle assembly BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097014 ciliary plasm CC
GO:0097223 obsolete sperm part CC
GO:0097224 sperm connecting piece CC
GO:0097729 9+2 motile cilium CC
GO:0099568 cytoplasmic region CC
GO:0120025 plasma membrane bounded cell projection CC
GO:0120031 plasma membrane bounded cell projection assembly BP
GO:0120036 plasma membrane bounded cell projection organization BP
GO:0120038 obsolete plasma membrane bounded cell projection part CC
GO:1904158 axonemal central apparatus assembly BP