Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene49637
View in Genome Browser
Position
hic_scaffold_23:7490554-7495291 (+)
4737bp
Gene Type
gene
Gene Description (Protein Product)
"FGGY family of carbohydrate kinases
Organism
Phyllostachys edulis
Also AS AT1G80460

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene50961 glycerol-3-phosphate acyltransferase
PH02Gene50701 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
Regulatory gene
PH02Gene00239 zinc finger
PH02Gene00399 Homeodomain
PH02Gene00476 Homeobox domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0002237 response to molecule of bacterial origin BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004370 glycerol kinase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005829 cytosol CC
GO:0005975 carbohydrate metabolic process BP
GO:0006066 alcohol metabolic process BP
GO:0006071 glycerol metabolic process BP
GO:0006072 glycerol-3-phosphate metabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006638 neutral lipid metabolic process BP
GO:0006639 acylglycerol metabolic process BP
GO:0006641 triglyceride metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009628 response to abiotic stimulus BP
GO:0009636 response to toxic substance BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010188 response to microbial phytotoxin BP
GO:0016052 carbohydrate catabolic process BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016773 phosphotransferase activity, alcohol group as acceptor MF
GO:0019400 alditol metabolic process BP
GO:0019405 alditol catabolic process BP
GO:0019563 glycerol catabolic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019751 polyol metabolic process BP
GO:0042221 response to chemical BP
GO:0042742 defense response to bacterium BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044262 cellular carbohydrate metabolic process BP
GO:0044275 cellular carbohydrate catabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044282 small molecule catabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046164 alcohol catabolic process BP
GO:0046167 glycerol-3-phosphate biosynthetic process BP
GO:0046174 polyol catabolic process BP
GO:0046486 glycerolipid metabolic process BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0052646 alditol phosphate metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0080167 response to karrikin BP
GO:0090407 organophosphate biosynthetic process BP
GO:0098542 defense response to other organism BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901575 organic substance catabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901616 organic hydroxy compound catabolic process BP
KEGG Term Name Description
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.
map01100 Metabolic pathways -
map00561 Glycerolipid metabolism -