Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene49675
View in Genome Browser
Position
hic_scaffold_20:22065135-22080391 (+)
15256bp
Gene Type
gene
Gene Description (Protein Product)
Elongation factor Tu GTP binding domain
Organism
Phyllostachys edulis
Also AS AT5G13650

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene50547 Cold shock protein domain
PH02Gene51198 Protein translocase subunit secA
PH02Gene51199 Protein translocase subunit secA
Regulatory gene
PH02Gene00304 Dof domain, zinc finger
PH02Gene00315 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PH02Gene00562 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006364 rRNA processing BP
GO:0006396 RNA processing BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0016070 RNA metabolic process BP
GO:0016072 rRNA metabolic process BP
GO:0022613 ribonucleoprotein complex biogenesis BP
GO:0031647 regulation of protein stability BP
GO:0034470 ncRNA processing BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034660 ncRNA metabolic process BP
GO:0042254 ribosome biogenesis BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0050821 protein stabilization BP
GO:0050896 response to stimulus BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090304 nucleic acid metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP