Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene49931
View in Genome Browser
Position
hic_scaffold_13:105825490-105828937 (+)
3447bp
Gene Type
gene
Gene Description (Protein Product)
ATP synthase gamma chain
Organism
Phyllostachys edulis
Also AS AT2G33040

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene50061 Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells
Regulatory gene
PH02Gene00094 Lateral organ boundaries (LOB) domain
PH02Gene00718 Histone-lysine N-methyltransferase
PH02Gene01001 ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005730 nucleolus CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005743 mitochondrial inner membrane CC
GO:0005753 mitochondrial proton-transporting ATP synthase complex CC
GO:0008270 zinc ion binding MF
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0016020 membrane CC
GO:0016469 proton-transporting two-sector ATPase complex CC
GO:0019866 organelle inner membrane CC
GO:0030312 external encapsulating structure CC
GO:0031090 organelle membrane CC
GO:0031966 mitochondrial membrane CC
GO:0031967 organelle envelope CC
GO:0031974 membrane-enclosed lumen CC
GO:0031975 envelope CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044428 obsolete nuclear part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044455 obsolete mitochondrial membrane part CC
GO:0044464 obsolete cell part CC
GO:0045259 proton-transporting ATP synthase complex CC
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0070013 intracellular organelle lumen CC
GO:0071944 cell periphery CC
GO:0098796 membrane protein complex CC
GO:0098798 mitochondrial protein-containing complex CC
GO:0098800 inner mitochondrial membrane protein complex CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00190 Oxidative phosphorylation -