Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene50060
View in Genome Browser
Position
hic_scaffold_3:60563600-60569357 (+)
5757bp
Gene Type
gene
Gene Description (Protein Product)
ADP-ribosylation factor family
Organism
Phyllostachys edulis
Also AS AT4G17170

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene50732 Organic solute transporter Ostalpha
PH02Gene50137 Organic solute transporter Ostalpha
PH02Gene50610 respiratory burst oxidase homolog protein
Regulatory gene
PH02Gene01234 HSF-type DNA-binding
PH02Gene03550 Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
PH02Gene05710 HSF-type DNA-binding

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000139 Golgi membrane CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005773 vacuole CC
GO:0005794 Golgi apparatus CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport BP
GO:0008150 biological_process BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016192 vesicle-mediated transport BP
GO:0030100 regulation of endocytosis BP
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032879 regulation of localization BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051049 regulation of transport BP
GO:0051128 regulation of cellular component organization BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0060627 regulation of vesicle-mediated transport BP
GO:0065007 biological regulation BP
GO:0071944 cell periphery CC
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098791 Golgi apparatus subcompartment CC