PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	PH02Gene50128 View in Genome Browser
Position	hic_scaffold_13:98335653-98338164 (+) 2511bp
Gene Type	gene
Gene Description (Protein Product)	"Removal of H(2)O(2)
Organism	Phyllostachys edulis
Also AS	AT2G38380

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	PH02Gene50635 cytochrome p450 PH02Gene51414 cytochrome p450 PH02Gene50629 Belongs to the TUB family
Regulatory gene	PH02Gene00315 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains PH02Gene00539 RWP-RK domain PH02Gene00628 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000902	cell morphogenesis	BP
GO:0002215	defense response to nematode	BP
GO:0002682	regulation of immune system process	BP
GO:0002684	positive regulation of immune system process	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004601	peroxidase activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005773	vacuole	CC
GO:0005774	vacuolar membrane	CC
GO:0005794	Golgi apparatus	CC
GO:0006950	response to stress	BP
GO:0006952	defense response	BP
GO:0006970	response to osmotic stress	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009314	response to radiation	BP
GO:0009416	response to light stimulus	BP
GO:0009505	plant-type cell wall	CC
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009617	response to bacterium	BP
GO:0009620	response to fungus	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009636	response to toxic substance	BP
GO:0009651	response to salt stress	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009735	response to cytokinin	BP
GO:0009791	post-embryonic development	BP
GO:0009826	unidimensional cell growth	BP
GO:0009908	flower development	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010035	response to inorganic substance	BP
GO:0010038	response to metal ion	BP
GO:0010043	response to zinc ion	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0016049	cell growth	BP
GO:0016209	antioxidant activity	MF
GO:0016491	oxidoreductase activity	MF
GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	MF
GO:0020037	heme binding	MF
GO:0022414	reproductive process	BP
GO:0030312	external encapsulating structure	CC
GO:0031090	organelle membrane	CC
GO:0031347	regulation of defense response	BP
GO:0031349	positive regulation of defense response	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032989	cellular component morphogenesis	BP
GO:0035821	modulation of process of another organism	BP
GO:0040007	growth	BP
GO:0040008	regulation of growth	BP
GO:0042221	response to chemical	BP
GO:0042742	defense response to bacterium	BP
GO:0043207	response to external biotic stimulus	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044003	modulation by symbiont of host process	BP
GO:0044237	cellular metabolic process	BP
GO:0044403	biological process involved in symbiotic interaction	BP
GO:0044419	biological process involved in interspecies interaction between organisms	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044437	obsolete vacuolar part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0045088	regulation of innate immune response	BP
GO:0045089	positive regulation of innate immune response	BP
GO:0045926	negative regulation of growth	BP
GO:0046906	tetrapyrrole binding	MF
GO:0048037	obsolete cofactor binding	MF
GO:0048046	apoplast	CC
GO:0048367	shoot system development	BP
GO:0048518	positive regulation of biological process	BP
GO:0048519	negative regulation of biological process	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048584	positive regulation of response to stimulus	BP
GO:0048589	developmental growth	BP
GO:0048608	reproductive structure development	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0050776	regulation of immune response	BP
GO:0050778	positive regulation of immune response	BP
GO:0050789	regulation of biological process	BP
GO:0050832	defense response to fungus	BP
GO:0050896	response to stimulus	BP
GO:0051701	biological process involved in interaction with host	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0051716	cellular response to stimulus	BP
GO:0051817	obsolete modulation of process of other organism involved in symbiotic interaction	BP
GO:0052031	modulation by symbiont of host defense response	BP
GO:0052033	obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	BP
GO:0052166	induction by symbiont of host innate immune response	BP
GO:0052167	modulation by symbiont of host innate immune response	BP
GO:0052169	obsolete pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response	BP
GO:0052173	response to defenses of other organism	BP
GO:0052200	response to host defenses	BP
GO:0052255	modulation by symbiont of host defense response	BP
GO:0052257	obsolete pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction	BP
GO:0052305	induction by symbiont of host innate immune response	BP
GO:0052306	modulation by symbiont of host innate immune response	BP
GO:0052308	obsolete pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction	BP
GO:0052509	induction by symbiont of host defense response	BP
GO:0052510	induction by symbiont of host defense response	BP
GO:0052552	modulation by symbiont of host immune response	BP
GO:0052553	modulation by symbiont of host immune response	BP
GO:0052555	induction by symbiont of host immune response	BP
GO:0052556	induction by symbiont of host immune response	BP
GO:0052564	response to host immune response	BP
GO:0052572	response to host immune response	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0060560	developmental growth involved in morphogenesis	BP
GO:0061458	reproductive system development	BP
GO:0065007	biological regulation	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0072593	reactive oxygen species metabolic process	BP
GO:0075136	response to host	BP
GO:0080134	regulation of response to stress	BP
GO:0090567	reproductive shoot system development	BP
GO:0097159	organic cyclic compound binding	MF
GO:0097237	cellular response to toxic substance	BP
GO:0098542	defense response to other organism	BP
GO:0098588	bounding membrane of organelle	CC
GO:0098754	detoxification	BP
GO:0098805	membrane	CC
GO:0098869	cellular oxidant detoxification	BP
GO:1901363	heterocyclic compound binding	MF
GO:1990748	cellular detoxification	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.