Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PH02Gene50581
View in Genome Browser
Position
hic_scaffold_4261:1557-4625 (-)
3068bp
Gene Type
gene
Gene Description (Protein Product)
Senescence-inducible chloroplast stay-green protein 1
Organism
Phyllostachys edulis
Also AS AT4G11910

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PH02Gene51094 Pheophorbide a oxygenase
PH02Gene51449 The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006778 porphyrin-containing compound metabolic process BP
GO:0006787 porphyrin-containing compound catabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009987 cellular process BP
GO:0015994 chlorophyll metabolic process BP
GO:0015996 chlorophyll catabolic process BP
GO:0019439 aromatic compound catabolic process BP
GO:0033013 tetrapyrrole metabolic process BP
GO:0033015 tetrapyrrole catabolic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042440 pigment metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044270 cellular nitrogen compound catabolic process BP
GO:0046149 pigment catabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046700 heterocycle catabolic process BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051187 obsolete cofactor catabolic process BP
GO:0071704 organic substance metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901361 organic cyclic compound catabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map00860 Porphyrin and chlorophyll metabolism -