Basic Information
Gene Structure
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Domain
| Database | EntryID | E-Value | Start | end | InterPro ID | Description |
|---|
Regulation&Interaction
Annotation
Orthologous Group
| Orthologous ID | Species Number | All hits in PereRegDB | Hits of this species | Orthologous Detail |
|---|
Expression Profile
| DataSet | Number of Samples expressed(TPM>1) | Mean | Min | Max | Standard deviation(SD) | Coeffcient variation(CV) |
|---|
Pathway
| GO Term | Description | GO Category |
|---|---|---|
| GO:0003674 | molecular_function | MF |
| GO:0005048 | signal sequence binding | MF |
| GO:0005215 | transporter activity | MF |
| GO:0005488 | binding | MF |
| GO:0005515 | protein binding | MF |
| GO:0005575 | cellular_component | CC |
| GO:0005622 | intracellular anatomical structure | CC |
| GO:0005623 | obsolete cell | CC |
| GO:0005634 | nucleus | CC |
| GO:0005635 | nuclear envelope | CC |
| GO:0005737 | cytoplasm | CC |
| GO:0006606 | protein import into nucleus | BP |
| GO:0006810 | transport | BP |
| GO:0006886 | intracellular protein transport | BP |
| GO:0006913 | nucleocytoplasmic transport | BP |
| GO:0008104 | protein localization | BP |
| GO:0008139 | nuclear localization sequence binding | MF |
| GO:0008150 | biological_process | BP |
| GO:0008565 | obsolete protein transporter activity | MF |
| GO:0010468 | regulation of gene expression | BP |
| GO:0012505 | endomembrane system | CC |
| GO:0015031 | protein transport | BP |
| GO:0015833 | peptide transport | BP |
| GO:0016020 | membrane | CC |
| GO:0017038 | protein import | BP |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | BP |
| GO:0019222 | regulation of metabolic process | BP |
| GO:0031090 | organelle membrane | CC |
| GO:0031323 | regulation of cellular metabolic process | BP |
| GO:0031965 | nuclear membrane | CC |
| GO:0031967 | organelle envelope | CC |
| GO:0031975 | envelope | CC |
| GO:0033036 | macromolecule localization | BP |
| GO:0033218 | amide binding | MF |
| GO:0033365 | protein localization to organelle | BP |
| GO:0034504 | protein localization to nucleus | BP |
| GO:0034613 | protein localization | BP |
| GO:0042277 | peptide binding | MF |
| GO:0042802 | identical protein binding | MF |
| GO:0042886 | amide transport | BP |
| GO:0043226 | organelle | CC |
| GO:0043227 | membrane-bounded organelle | CC |
| GO:0043229 | intracellular organelle | CC |
| GO:0043231 | intracellular membrane-bounded organelle | CC |
| GO:0043484 | regulation of RNA splicing | BP |
| GO:0044422 | obsolete organelle part | CC |
| GO:0044424 | obsolete intracellular part | CC |
| GO:0044428 | obsolete nuclear part | CC |
| GO:0044446 | obsolete intracellular organelle part | CC |
| GO:0044464 | obsolete cell part | CC |
| GO:0045184 | establishment of protein localization | BP |
| GO:0046907 | intracellular transport | BP |
| GO:0050789 | regulation of biological process | BP |
| GO:0050794 | regulation of cellular process | BP |
| GO:0051169 | nuclear transport | BP |
| GO:0051170 | import into nucleus | BP |
| GO:0051171 | regulation of nitrogen compound metabolic process | BP |
| GO:0051179 | localization | BP |
| GO:0051234 | establishment of localization | BP |
| GO:0051252 | regulation of RNA metabolic process | BP |
| GO:0051641 | cellular localization | BP |
| GO:0051649 | establishment of localization in cell | BP |
| GO:0060255 | regulation of macromolecule metabolic process | BP |
| GO:0065007 | biological regulation | BP |
| GO:0070727 | cellular macromolecule localization | BP |
| GO:0071702 | organic substance transport | BP |
| GO:0071705 | nitrogen compound transport | BP |
| GO:0072594 | establishment of protein localization to organelle | BP |
| GO:0080090 | regulation of primary metabolic process | BP |
| KEGG Term | Name | Description |
|---|---|---|
| map03013 | RNA transport | RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation. |