PPGR - Gene Detail

Basic Information

Gene ID	MA_908464g0010.g View in Genome Browser
Position	MA_908464:4644-5045 (-) 401bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX MLL subfamily
Organism	Picea abies
Also AS	AT4G27910

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

MA_99195g0010.g Belongs to the SKP1 family

MA_9970379g0010.g Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling

MA_9266178g0010.g Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005911	cell-cell junction	CC
GO:0008150	biological_process	BP
GO:0009292	horizontal gene transfer	BP
GO:0009294	DNA-mediated transformation	BP
GO:0009506	plasmodesma	CC
GO:0009893	positive regulation of metabolic process	BP
GO:0009987	cellular process	BP
GO:0010604	positive regulation of macromolecule metabolic process	BP
GO:0010638	positive regulation of organelle organization	BP
GO:0019222	regulation of metabolic process	BP
GO:0030054	cell junction	CC
GO:0031056	regulation of histone modification	BP
GO:0031058	positive regulation of histone modification	BP
GO:0031060	regulation of histone methylation	BP
GO:0031062	positive regulation of histone methylation	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031325	positive regulation of cellular metabolic process	BP
GO:0031399	regulation of protein modification process	BP
GO:0031401	positive regulation of protein modification process	BP
GO:0032268	regulation of protein metabolic process	BP
GO:0032270	positive regulation of protein metabolic process	BP
GO:0033043	regulation of organelle organization	BP
GO:0033044	regulation of chromosome organization	BP
GO:0044764	obsolete multi-organism cellular process	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051128	regulation of cellular component organization	BP
GO:0051130	positive regulation of cellular component organization	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051173	positive regulation of nitrogen compound metabolic process	BP
GO:0051246	regulation of protein metabolic process	BP
GO:0051247	positive regulation of protein metabolic process	BP
GO:0051569	regulation of histone H3-K4 methylation	BP
GO:0051571	positive regulation of histone H3-K4 methylation	BP
GO:0051704	obsolete multi-organism process	BP
GO:0055044	symplast	CC
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0080090	regulation of primary metabolic process	BP
GO:1902275	regulation of chromatin organization	BP
GO:1905269	positive regulation of chromatin organization	BP
GO:2001252	positive regulation of chromosome organization	BP