PPGR - Gene Detail

Basic Information

Gene ID	MA_93934g0010.g View in Genome Browser
Position	MA_93934:3772-9710 (+) 5938bp
Gene Type	gene
Gene Description (Protein Product)	Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide
Organism	Picea abies
Also AS	AT1G20630

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

MA_9401507g0010.g Ubiquitin-like domain

MA_9420337g0010.g Ubiquitin family

MA_94077g0010.g Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000302	response to reactive oxygen species	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004096	catalase activity	MF
GO:0004601	peroxidase activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005777	peroxisome	CC
GO:0006950	response to stress	BP
GO:0006979	response to oxidative stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009636	response to toxic substance	BP
GO:0009987	cellular process	BP
GO:0010035	response to inorganic substance	BP
GO:0016209	antioxidant activity	MF
GO:0016491	oxidoreductase activity	MF
GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	MF
GO:0016999	antibiotic metabolic process	BP
GO:0017001	antibiotic catabolic process	BP
GO:0017144	xenobiotic metabolic process	BP
GO:0020037	heme binding	MF
GO:0042221	response to chemical	BP
GO:0042493	response to xenobiotic stimulus	BP
GO:0042542	response to hydrogen peroxide	BP
GO:0042579	microbody	CC
GO:0042737	xenobiotic catabolic process	BP
GO:0042743	hydrogen peroxide metabolic process	BP
GO:0042744	hydrogen peroxide catabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046677	response to antibiotic	BP
GO:0046906	tetrapyrrole binding	MF
GO:0048037	obsolete cofactor binding	MF
GO:0050896	response to stimulus	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051187	obsolete cofactor catabolic process	BP
GO:0051716	cellular response to stimulus	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0072593	reactive oxygen species metabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0097237	cellular response to toxic substance	BP
GO:0098754	detoxification	BP
GO:0098869	cellular oxidant detoxification	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901700	response to oxygen-containing compound	BP
GO:1990748	cellular detoxification	BP

KEGG Term	Name	Description
map04146	Peroxisome	Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00630	Glyoxylate and dicarboxylate metabolism	-
map00380	Tryptophan metabolism	-