PPGR - Gene Detail

Basic Information

Gene ID	PILA_03994.g View in Genome Browser
Position	scaffold_8580:4617629-4655896 (+) 38267bp
Gene Type	gene
Gene Description (Protein Product)	4-coumarate--CoA ligase-like 9
Organism	Pinus lambertiana
Also AS	AT1G20510

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

PILA_21228.g One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex

PILA_20917.g One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation

PILA_20789.g Ankyrin repeats (many copies)

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004321	fatty-acyl-CoA synthase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005777	peroxisome	CC
GO:0006082	organic acid metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009694	jasmonic acid metabolic process	BP
GO:0009695	jasmonic acid biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010817	regulation of hormone levels	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0016408	C-acyltransferase activity	MF
GO:0016740	transferase activity	MF
GO:0016746	acyltransferase activity	MF
GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	MF
GO:0019752	carboxylic acid metabolic process	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0042445	hormone metabolic process	BP
GO:0042446	hormone biosynthetic process	BP
GO:0042579	microbody	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071704	organic substance metabolic process	BP
GO:0072330	monocarboxylic acid biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP