Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
PILA_06242.g
View in Genome Browser
Position
scaffold_1644:2971068-2971736 (+)
668bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the terpene synthase family
Organism
Pinus lambertiana
Also AS AT4G02780

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
PILA_00290.g MADS-box transcription factor
PILA_00341.g ethylene-responsive transcription factor
PILA_01535.g MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0006629 lipid metabolic process BP
GO:0006644 phospholipid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008299 isoprenoid biosynthetic process BP
GO:0008300 isoprenoid catabolic process BP
GO:0008610 lipid biosynthetic process BP
GO:0008654 phospholipid biosynthetic process BP
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009395 phospholipid catabolic process BP
GO:0009987 cellular process BP
GO:0016042 lipid catabolic process BP
GO:0016101 diterpenoid metabolic process BP
GO:0016102 diterpenoid biosynthetic process BP
GO:0016103 diterpenoid catabolic process BP
GO:0016114 terpenoid biosynthetic process BP
GO:0016115 terpenoid catabolic process BP
GO:0016853 isomerase activity MF
GO:0016872 intramolecular lyase activity MF
GO:0019637 organophosphate metabolic process BP
GO:0042214 terpene metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044242 cellular lipid catabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0046246 terpene biosynthetic process BP
GO:0046434 organophosphate catabolic process BP
GO:0050559 copalyl diphosphate synthase activity MF
GO:0071704 organic substance metabolic process BP
GO:0090407 organophosphate biosynthetic process BP
GO:1901575 organic substance catabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901944 miltiradiene metabolic process BP
GO:1901946 miltiradiene biosynthetic process BP
GO:1901947 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process BP
GO:1901948 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate catabolic process BP
GO:1901949 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map00904 Diterpenoid biosynthesis -
map00904 Diterpenoid biosynthesis -
map00904 Diterpenoid biosynthesis -
map00904 Diterpenoid biosynthesis -
map00900 Terpenoid backbone biosynthesis Terpenoids, also known as isoprenoids, are a large class of natural products consisting of isoprene (C5) units. There are two biosynthetic pathways, the mevalonate pathway [MD:M00095] and the non-mevalonate pathway or the MEP/DOXP pathway [MD:M00096], for the terpenoid building blocks: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). The action of prenyltransferases then generates higher-order building blocks: geranyl diphosphate (GPP), farsenyl diphosphate (FPP), and geranylgeranyl diphosphate (GGPP), which are the precursors of monoterpenoids (C10), sesquiterpenoids (C15), and diterpenoids (C20), respectively. Condensation of these building blocks gives rise to the precursors of sterols (C30) and carotenoids (C40). The MEP/DOXP pathway is absent in higher animals and fungi, but in green plants the MEP/DOXP and mevalonate pathways co-exist in separate cellular compartments. The MEP/DOXP pathway, operating in the plastids, is responsible for the formation of essential oil monoterpenes and linalyl acetate, some sesquiterpenes, diterpenes, and carotenoids and phytol. The mevalonate pathway, operating in the cytosol, gives rise to triterpenes, sterols, and most sesquiterpenes.