Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
PILA_23049.g
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Position
scaffold_5169:100807-102358 (+)
1551bp
Gene Type
gene
Gene Description (Protein Product)
Crooked neck-like protein
Organism
Pinus lambertiana
Also AS AT5G41770

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PILA_36556.g WD domain, G-beta repeat
PILA_29348.g Protein CWC15 homolog
PILA_31642.g pre-mRNA-processing factor
Regulatory gene
PILA_00656.g dof zinc finger protein
PILA_01372.g dof zinc finger protein
PILA_01978.g Heat Stress Transcription Factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.